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Table 6 Contrast estimatesa (standard error) for milk traits within pathogens groupb

From: Presence of pathogen DNA in milk harvested from quarters is associated to changes in cows’ milk yield and composition

Traitc

Absent vs. present

Absent vs. minor

Absent vs. major

Absent vs. other

Minor vs. major

Minor vs. other

Major vs. other

SCS

-5.69 (1.00)***

-1.23 (0.39)**

-2.33 (0.35)***

-1.23 (0.39)**

-1.10 (0.37)**

-0.89 (0.57)

0.21 (0.54)

DSCC, %

-34.95 (8.53)***

-7.78 (3.32)*

-14.63 (2.93)***

-7.78 (3.32)*

-6.84 (3.13)*

-4.75 (4.81)

2.09 (4.54)

DSCS

-6.47 (1.16)***

-1.40 (0.45)**

-2.67 (0.40)***

-1.40 (0.45)**

-1.27 (0.42)**

-0.99 (0.65)

0.28 (0.62)

Milk yield, kg/d

4.54 (3.60)

1.60 (1.39)

2.32 (1.24)

1.60 (1.39)

0.72 (1.33)

-0.96 (2.05)

-1.68 (1.94)

Fat, %

-0.63 (0.40)

-0.14 (0.16)

-0.019 (0.14)

-0.14 (0.16)

0.12 (0.15)

-0.34 (0.23)

-0.46 (0.21)*

Protein, %

-0.21 (0.18)

-0.002 (0.07)

-0.03 (0.06)

-0.002 (0.07)

-0.03 (0.06)

-0.17 (0.10)

-0.14 (0.10)

Casein, %

-0.13 (0.16)

0.01 (0.06)

-0.001 (0.05)

0.01 (0.06)

-0.01 (0.06)

-0.16 (0.09)

-0.15 (0.08)

Casein index

0.009 (0.008)

0.004 (0.003)

0.01 (0.00)**

0.004 (0.003)

0.004 (0.003)

-0.007 (0.004)

-0.010 (0.004)

Lactose, %

0.08 (0.10)

0.04 (0.04)

0.10 (0.04)**

0.04 (0.04)

0.06 (0.04)

-0.11 (0.06)

-0.16 (0.06)

  1. a***P ≤ 0.001, **P ≤ 0.01, *P ≤ 0.05
  2. bDescription of groups is provided in Table 2
  3. cSCS Somatic cell score, calculated as SCS = 3 + log2(SCC/100,000), where SCC is somatic cell count (cells/mL), DSCC Polymorphonuclear neutrophils and lymphocytes (%) out of the total SCC, DSCS Differential somatic cell score, calculated as DSCS = 3 + log2(DSCCN/100,000), where DSCCN is the combined number of polymorphonuclear neutrophils and lymphocytes in milk (cells/mL)