Table 3 Overview of the sequencing read classifications
From: Detection and genetic characterization of equine viruses in Sweden using viral metagenomics
Pool ID | Unclassified (% of total) | Classified (% of classified) | |||
|---|---|---|---|---|---|
Eukaryote | Viruses | Bacteria | Archaea | ||
1s (fever) | 24% | 22% | 1.5% | 76% | < 1% |
1n (fever) | 75% | 67% | 31% | 1.5% | < 1% |
2s (fever) | 65% | 33% | < 1% | 66% | < 1% |
2n (fever) | 82% | 93% | < 1% | 5.4% | < 1% |
3s (fever) | 63% | 50% | < 1% | 50% | < 1% |
3n (fever) | 77% | 73% | < 1% | 25% | < 1% |
4s (fever) | 55% | 20% | < 1% | 79% | < 1% |
4n (fever) | 84% | 94% | 2.4% | 3% | < 1% |
5s (nonfebrile) | 64% | 36% | < 1% | 63% | < 1% |
5n (nonfebrile) | 76% | 62% | 24% | 14% | < 1% |