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Table 2 The primes for standard plasmids construction and phylogenetic analysis

From: Development of a triplex TaqMan probe-based real-time PCR assay for simultaneous detection of swine influenza virus, porcine reproductive and respiratory syndrome virus, and porcine circovirus type 2

Purpose

Primer

Sequence (5’-3’)

Length

Gene

Standard plasmids constructions

SIV-F

AGTCTTCTAACCGAGGTCGAAACGT

978 bp

M

SIV-R

TTACTCCAGCTCTATGTTGACAAAA

PRRSV-F

ATACCAACTTCCTTCTGGACACTAA

1191 bp

M, N

PRRSV-R

CATGGTTCTCGCCAATTAAA

PCV2-F

CAGCACCTCGGCAGCACCTCAGCAG

1725 bp

Rep, Cap

PCV2-R

CGGTTTCAGCGATGACGTATCCAAG

Phylogenetic analysis

PRRSV-F

GTTTTAGCCTGTCTTTTTGCC

704 bp

GP5

PRRSV-R

AAGGTGCTTTTGGCGTTTTC

PCV2-F

CAGCACCTCGGCAGCACCTCAGCAG

1700 bp

Rep, Cap

PCV2-R

CGGTTTCAGCGATGACGTATCCAAG