Comparative study of the effects of baicalin and probenecid on microRNA expression profiles in porcine aortic vascular endothelial cells infected by Glaesserella parasuis

Table 2 Statistical summary of high-throughput sequencing data in PAVECs

Sample ID	Raw reads	Clean reads	Clean ratio (%)	all reads	miRbase	rRNA	tRNA	snoRNA	snRNA	mRNA
Control-1	21,317,664	20,420,831	95.79%	17,135,824	15,067,759	353,410	8,777	84,226	10,227	245,294
Control-2	20,643,224	19,788,145	95.86%	16,994,591	14,969,822	367,404	16,957	74,960	9,607	239,383
Control-3	18,010,330	17,181,466	95.40%	14,569,083	12,730,432	353,265	18,977	67,925	8,034	218,701
GPS-1	25,200,618	23,890,022	94.80%	18,262,232	15,474,712	417,622	26,013	81,589	9,466	328,972
GPS-2	20,865,781	19,290,080	92.45%	15,007,824	12,551,362	414,145	39,460	78,651	9,012	317,496
GPS-3	23,176,334	21,062,104	90.88%	15,816,178	13,110,349	435,118	46,734	94,019	13,269	364,962
GPS-BA50-1	22,080,979	20,347,773	92.15%	16,288,025	13,167,179	369,733	20,997	104,084	11,596	362,788
GPS-BA50-2	20,797,277	19,120,467	91.94%	15,046,554	12,114,524	379,192	22,579	91,706	10,535	340,802
GPS-BA50-3	21,505,674	19,514,984	90.74%	15,996,383	13,517,800	231,179	9,527	74,920	9,690	312,795
GPS-Probenecid-1	20,131,413	18,983,658	94.30%	14,356,661	11,500,601	536,846	28,734	85,647	11,973	317,777
GPS-Probenecid-2	18,806,435	17,738,433	94.32%	13,551,893	11,039,696	413,543	22,660	79,748	9,988	287,821
GPS-Probenecid-3	20,271,696	18,505,175	91.29%	14,235,786	11,597,897	418,881	26,487	76,109	10,458	324,372

Group 1 (Control-1, 2, 3): PAVECs only;
Group 2 (GPS-1, 2, 3): G. parasuis-infected PAVECs (1 × 10⁶ CFU/mL);
Group 3 (GPS-BA50-1, 2, 3): G. parasuis-infected PAVECs with baicalin (50 μg/mL) pretreatment
Group 4 (GPS-Probenecid-1, 2, 3): G. parasuis-infected PAVECs with probenecid (100 μM) treatment

ISSN: 1746-6148