Table 4 The GC content percentage, GenBank accession numbers, reference sequences, and similarity percentage for the species isolated in this study are presented for the SSU, ITS, LSU, and COX1 genes
From: Hookworm infections in carnivores in Iran: a One Health concern
Genes | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Hookworm species | SSU | ITS1 - 5.8S-ITS2 | LSU | COX1 | ||||||||
GC (%) | Accession no | Ref seq (% similarity) | GC (%) | Accession no | Ref seq (% similarity) | GC (%) | Accession no | Ref seq (% similarity) | GC (%) | Accession no | Ref seq (% similarity) | |
A. caninum | 49.37 | PQ317213 - 21 | AJ920347 (100) | 47.17 | PQ316544 - 52 | LC036567 (99.6) | 50.08 | PQ317814 - 22 | AM039739 (100) | 32.26 | PQ555168 - 76 | AJ407966 (98.7) |
A. tubaeforme | 49.37 | PQ317225 - 6 | NR | 46.97 | PQ316556 - 7 | JQ812691 (99.5) | 50.08 | PQ317826 - 7 | NR | 29.43 | PQ555180 - 1 | AJ407940 (99.8) |
U. stenocephala | 49.68 | PQ317222 - 24 | MN218457 (100) | 48.07 | PQ316553 - 5 | AF194145 (99.4) | 49.92 | PQ317823 - 5 | NR | 30.61 | PQ555177 - 9 | MT361501 (100) |